Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901391.1_cds_XP_016451402.1_45758
CDS Infomation

[gene=LOC107776095] [db_xref=GeneID:107776095] [protein=probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 isoform X2] [protein_id=XP_016451402.1] [location=join(9497..9640,12122..12409,12506..12593,13422..13543,13783..13922,14008..14080,14385..14473,14562..14667,15632..15844,16050..16244,16411..16488,17165..17390,17494..17498)] [gbkey=CDS]
Sequence

ATGGGGGCTGAGAACAAAACTGATGAAGAGAAGCAGAACGGAGACGGCACATTATTTGAT
CTCAATGATTACACCATCATCAAAGAAGGAGATGCTGAGATTCTTATGCATGCTAAAAAT
GAAGTTTTTTACAACAAAACTCAGGTGAATAACAGAGATATGTCTGTAGCTGTTTTGAGG
ACCTTTATATCACAACGAAAGCAGGAGCATGAAGCAATGTTGACCAGGCGACGAACCAAG
GCTGGAAATAAGGTACCTGATGCTAAAGCGGAAATCCCGGATGATTCAGGGCAGCATAAT
GGTGAATCCAATGATGGATCTGAAGTTTTGGAAGATGCATCCCATAATGAATCATGTAGC
AAACCAGAGGAAGAGACTAAAAACCTACGGGGAAAAGGCCGAGAAGAACTAAAGCCTCCA
CGAGTTCTCGAGGCTCTCTCAGCTTCTGGGTTGAGGGCTTTAAGGTATGCGCGTGAAGTC
GAAGGAATTAGTCAGGTTGTGGCCCTTGACAATGATAAAGCCTCTGTGGAAGCTTGCAGG
AGAAACATAAAATTTAATGGTTCAGTAGCATGCTCTAAGGTGGAGTCTCACCTTGCTGAT
GCGAGAGTTTATATGCTTACCCACCCAAAAGAATTTGATGTGGTTGATCTTGATCCTTAT
GGAGCACCTTCTGTGTTCCTGGACTCAGCAGTTCAATCTGTTGCTGATGGAGGGATGTTG
ATGTGTACCGCTACTGATATGGCAGTGTTATGTGGAGGAAATGGAGAAGTTTGCTATTCC
AAATATGGCTCCTATCCTTTGAGAGGAAAATATTGCCATGAAATGGCTTTGCGCATCCTT
CTTGCATCTATTGAGAGCCATGCAAATCGATATAAAAGATATATAGTTCCGGTATTATCT
GTTCAGATGGATTTCTATGTTCGTGTTTTTGTTCGTATATACACTTCTGCAAGTGATATG
AAAAGCACTCCTTTGAAGCTCTCATATGTCTATCAGTGCACTGGCTGTGACTCCTTCCAT
CTTCAGCCAGTTGGGAGGACCGTCTCAAAGAACAACAGTGTCAGATACCTTCCTGGATTT
GGCCCTGCCGTTTCTCAAGAGTGCAGTGATTGTGGTAAAAAATTTAACATGGGTGGACCC
ATCTGGTCTGCCCCCATCCATGATCAAGAATGGGTAGCTGCCATTCTCGCAGATGTGAAG
TCAATGAAGGATCGCTATCCTGCTTATGAGCGAATCTCTGCTGTGTTGACAACTGTCTCG
GAGGAATTACCTGATATTCCTCTGTTTCTGAGTCTGCACAATCTCTGTGCAACGCTGAAA
TGTACATCTCCCTCAGCAGTAATATTTCGCTCTGCTGTGATCAACGCAGGATATCGCATA
TCAGGGACTCATGTGAATCCTTTGGGGTTGAAAACAGATGCTCCTATGGATGTCATTTGG
GATATCATGCGTTGCTGGATTAAAAATCATCCTGTGAAAGCTCAACCATCTGACCAAGCT
GGAAGTGTGATTCTTGCTAAGGAACCTGTACTGCAGGCTAATTTTTCTCGGGCTGTTGCA
TCCCTTAGCAAGGCACAGGCGAAGAAGGTTGCTCGTTTCCTCCCTAATCCGGAAAGGCAT
TGGGGTCCAAAACTAAGGGCAGGCCGACAGATCACCAGCAAGCACGTGTCTCTTTTGGGT
CCCAAAGCTTTGAATGGAATTAACAACCATGAGAATGGTGATGGTAGCAACCATGAGGAT
GTTGAGGAGCCTGCAGCCAAGCAGTGA

Peptide Sequence

PEP ID

XP_016451402.1
PEP Infomation

PREDICTED: probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 isoform X2 [Nicotiana tabacum]
Sequence

MGAENKTDEEKQNGDGTLFDLNDYTIIKEGDAEILMHAKNEVFYNKTQVNNRDMSVAVLR
TFISQRKQEHEAMLTRRRTKAGNKVPDAKAEIPDDSGQHNGESNDGSEVLEDASHNESCS
KPEEETKNLRGKGREELKPPRVLEALSASGLRALRYAREVEGISQVVALDNDKASVEACR
RNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLDPYGAPSVFLDSAVQSVADGGML
MCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILLASIESHANRYKRYIVPVLS
VQMDFYVRVFVRIYTSASDMKSTPLKLSYVYQCTGCDSFHLQPVGRTVSKNNSVRYLPGF
GPAVSQECSDCGKKFNMGGPIWSAPIHDQEWVAAILADVKSMKDRYPAYERISAVLTTVS
EELPDIPLFLSLHNLCATLKCTSPSAVIFRSAVINAGYRISGTHVNPLGLKTDAPMDVIW
DIMRCWIKNHPVKAQPSDQAGSVILAKEPVLQANFSRAVASLSKAQAKKVARFLPNPERH
WGPKLRAGRQITSKHVSLLGPKALNGINNHENGDGSNHEDVEEPAAKQ

Transcript Sequence

Gene sequence data has not been registered.